Patent: L. Chen, Z. Zhao, and H. Yan, "Method for tracking an object in an image sequence,"
United States Patent, Number 10,255,692, 2019.
J. Cao, G. Guan, V. W. S. Ho, M. K. Wong, L. Y. Chan, C.Tang, Z. Y. Zhao, and H. Yan, "Establishment of morphological atlas of Caenorhabditis elegans embryo using deep-learning-based 4D segmentation,"
Nature Communications, accepted, 2020.
J. Cao, M. K. Wong, Z. Zhao, and H. Yan, "3DMMS: robust 3D membrane morphological segmentation of C. elegans embryo,"
BMC Bioinformatics, 20:176:1-13, 2019.
L. Chen, V. W. S. Ho, M. K. Wong, X. T. Huang, L. Y. Chan, H. C. K. Ng, X. Ren, H. Yan, and Z. Zhao, "Establishment of signaling interactions with cellular resolution for every cell cycle of embryogenesis,"
Genetics, 209(1):36-49, 2018.
X. T. Huang, Y. Zhu, L. H. L. Chan, Z. Zhao, and H. Yan, "Inference of cellular level signaling networks using single-cell gene expression data in Caenorhabditis elegans reveals mechanisms of cell fate specification,"
Bioinformatics, 33(10):1528-1535, 2017.
L. Chen, H. Yan, and Z. Zhao, "A probabilistic relaxation labeling (PRL) based method for C. elegans cell tracking in microscopic image sequences,"
IEEE Journal of Selected Topics in Signal Processing, 10(1):185-192, 2016.
X. T. Huang, Y. Zhu, L. L. H. Chan, Z. Zhao, and H. Yan, "An integrative C. elegans protein-protein interaction network with reliability assessment based on a probabilistic graphical model,"
Molecular BioSystems, 12:85-92, 2016.
V. W. S. Ho, M. K. Wong, X. An, D. Guan, J. Shao, K. He, J. Liao, L. Chen, X. Huang, Y. Xia, L. L. H. Chan, K. L. Chow, H. Yan, and Z. Zhao, "Systems-level quantification of division timing reveals a common genetic architecture controlling asynchrony and fate asymmetry,"
Molecular Systems Biology, 11:814:1-18., 2015.
L. Chen, L. L. H. Chan, Z. Zhao, and H. Yan, "A novel cell nuclei segmentation method for 3D C. elegans embryonic time-lapse images,"
BMC Bioinformatics, 14:328, 2013.